Cloudy SolarSoftware

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(Introduction)
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Our environment supports data from a growing number of solar instruments that currently includes RHESSI, SOHO/EIT, TRACE, SECCHI/EUVI, HINODE/XRT, and HINODE/EIS.
Our environment supports data from a growing number of solar instruments that currently includes RHESSI, SOHO/EIT, TRACE, SECCHI/EUVI, HINODE/XRT, and HINODE/EIS.
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<gallery caption="Overview of the Cloudy SolarSoftware concept" perrow="3">
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<gallery caption="Overview of the Cloudy SolarSoftware concept" perrow="3" widths="320px" heights="320px">
Image:CloudySSW.Step1.png|'''Figure 1.''' SHOW_SYNOP allows searching the VSO from within SSW IDL for solar data (Step 1).
Image:CloudySSW.Step1.png|'''Figure 1.''' SHOW_SYNOP allows searching the VSO from within SSW IDL for solar data (Step 1).
Image:CloudySSW.Step2.png|'''Figure 2.''' Data files found with SHOW_SYNOP can be sent to the PrepServer for pre-processing (Step 2).
Image:CloudySSW.Step2.png|'''Figure 2.''' Data files found with SHOW_SYNOP can be sent to the PrepServer for pre-processing (Step 2).
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Search results can be directly downloaded into the active SSW IDL environment or first pre-processed through our prep-server. To start searching with SHOW_SYNOP, first open the GUI by typing <code>SHOW_SYNOP</code> in your SSW IDL environment command-line. The red box highlights the VSO search form with "Start Time" and "End Time" specifying the search interval and "remote sites ->" defining the instrument (TRACE in this example). Click on the "Search" button to query the VSO for data files that will be displayed in the list below the search form shown in the green box in Figure 5. All of this capability can also be obtained by executing [[#Step_1:_Finding_the_Data_2|IDL scripts ]] from the command-line.
Search results can be directly downloaded into the active SSW IDL environment or first pre-processed through our prep-server. To start searching with SHOW_SYNOP, first open the GUI by typing <code>SHOW_SYNOP</code> in your SSW IDL environment command-line. The red box highlights the VSO search form with "Start Time" and "End Time" specifying the search interval and "remote sites ->" defining the instrument (TRACE in this example). Click on the "Search" button to query the VSO for data files that will be displayed in the list below the search form shown in the green box in Figure 5. All of this capability can also be obtained by executing [[#Step_1:_Finding_the_Data_2|IDL scripts ]] from the command-line.
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<gallery caption="SHOW_SYNOP for finding data" perrow="2">
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SHOW_SYNOP can search data for the following instruments:
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* Big Bear Solar Observatory (BBSO)
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* Calisto Radio Observations
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* FERMI GBM
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* HINODE/EIS
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* HINODE/XRT
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* Kanzelhohe Solar Observatory
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* Meudon Observatory
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* Nancay Radio Observatory
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* Nobeyama Radioheliograph
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* Phoenix ETH Zurich
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* SOHO/EIT
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* SOHO/MDI
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* Solar X-ray Spectrometer (SOXS)
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* STEREO/SECCHI-COR1/2
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* STEREO/SECCHI-EUVI
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* TRACE
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<gallery caption="SHOW_SYNOP for finding data" perrow="2" widths="320px" heights="320px">
Image:CloudySSW.Show_synop.Search.png|'''Figure 4.''' Screen shot of the SHOW_SYNOP GUI used to find and retrieve specific data sets. The user-specified start and end times are entered inside the red box, and the instrument of interest is selected from the extensive list in the pull-down menu. Data files of interest are then located by pressing the "Search" button.
Image:CloudySSW.Show_synop.Search.png|'''Figure 4.''' Screen shot of the SHOW_SYNOP GUI used to find and retrieve specific data sets. The user-specified start and end times are entered inside the red box, and the instrument of interest is selected from the extensive list in the pull-down menu. Data files of interest are then located by pressing the "Search" button.
Image:CloudySSW.Show_Synop.Searched.png|'''Figure 5.''' The retrieved data files are shown in the green box after pressing the "Search" button.  
Image:CloudySSW.Show_Synop.Searched.png|'''Figure 5.''' The retrieved data files are shown in the green box after pressing the "Search" button.  
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=== Step 2: Pre-processing ===
=== Step 2: Pre-processing ===
Typically, instrument data found with the VSO are unprocessed level-0 data. The PrepServer offers remote pre-processing of those data from within SHOW_SYNOP or from the IDL command-line before or after downloading to the user's computer. The big advantage is that the user does not have to maintain instrument-specific data analysis procedures or calibration files on his computer. Once the files containing the data of interest has been retrieved and prepped if necessary, the file names are displayed in the SHOW_SYNOP window (green box in Figure 5).  
Typically, instrument data found with the VSO are unprocessed level-0 data. The PrepServer offers remote pre-processing of those data from within SHOW_SYNOP or from the IDL command-line before or after downloading to the user's computer. The big advantage is that the user does not have to maintain instrument-specific data analysis procedures or calibration files on his computer. Once the files containing the data of interest has been retrieved and prepped if necessary, the file names are displayed in the SHOW_SYNOP window (green box in Figure 5).  
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<!--'''Move all bolded text to the script examples page. There are two different pre-processing behaviors configurable:'''
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'''Move all bolded text to the script examples page. There are two different pre-processing behaviors configurable:'''
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* '''By default a click on "Download" retrieves the level-0 data file, stores it on the local hard drive and adds it to a list (Figure 6, blue box). The level-0 data file is pre-processed by selecting it in the blue box and clicking on "Display". This uploads the level-0 data file to the PrepServer where it is pre-processed, and downloads the pre-processed product to the local hard drive.'''
* '''By default a click on "Download" retrieves the level-0 data file, stores it on the local hard drive and adds it to a list (Figure 6, blue box). The level-0 data file is pre-processed by selecting it in the blue box and clicking on "Display". This uploads the level-0 data file to the PrepServer where it is pre-processed, and downloads the pre-processed product to the local hard drive.'''
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* '''In auto-preprocessing mode, which can be activated in the configuration menu (Figures 5 and 7, yellow box), SHOW_SYNOP sends the URL of the level-0 data file to the PrepServer and only downloads the pre-processed data.
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* '''In auto-preprocessing mode, which can be activated in the configuration menu (Figures 5 and 7, yellow box), SHOW_SYNOP sends the URL of the level-0 data file to the PrepServer and only downloads the pre-processed data-->
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(Note that in case of zipped data files (e.g. TRACE), SHOW_SYNOP opens a selection widget to help in choosing the desired image(s) (see Figure 8).
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'''
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<span style="color:#FF0000">'''Please note: SHOW_SYNOP and the PrepServer are dependent on data providers for downloading speed. Be aware that downloading data may take a few minutes, during which SHOW_SYNOP or your SSW IDL session may be unresponsive.</span>'''
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For more details on the prep-server including accessing it from the IDL command-line, please click [[#Step_2:_Pre-processing_2|here]]
For more details on the prep-server including accessing it from the IDL command-line, please click [[#Step_2:_Pre-processing_2|here]]
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<gallery caption="SHOW_SYNOP for downloading and pre-processing data" perrow="2" widths="320px" heights="320px">
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<gallery caption="SHOW_SYNOP for downloading and pre-processing data" perrow="3">
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Image:CloudySSW.Show_synop.Downloaded.png|'''Figure 6.''' In this screen shot of SHOW_SYNOP the window highlighted in blue indicates the local file repository with level-0 and pre-processed data files.
Image:CloudySSW.Show_synop.Downloaded.png|'''Figure 6.''' In this screen shot of SHOW_SYNOP the window highlighted in blue indicates the local file repository with level-0 and pre-processed data files.
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'''Delete Figures 7 and 8.'''
 
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Image:CloudySSW.Show synop.Options.png|'''Figure 7.''' This options menu allows configuring the pre-processing behavior: download level-0 data or request pre-processed data.
 
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Image:CloudySSW.Selection.Widget.Figure4.png|'''Figure 8.''' When pre-processing a TRACE data file that contains multiple TRACE images, a selection widget will open allowing picking a set of images.
 
</gallery>
</gallery>
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=== Step 3: Visualizing ===
=== Step 3: Visualizing ===
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Like all other GUIs discussed in this nugget, PLOTMAN can also be called from the command-line. Examples can be found [[#Step_3:_Visualizing_2|here]].
Like all other GUIs discussed in this nugget, PLOTMAN can also be called from the command-line. Examples can be found [[#Step_3:_Visualizing_2|here]].
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<gallery caption="Example images displayed with PLOTMAN" perrow="3">
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<gallery caption="Example images displayed with PLOTMAN" perrow="3" widths="320px" heights="320px">
Image:CloudySSW.XRT.Figure3.png|'''Figure 9.''' This figure shows PLOTMAN displaying an XRT image (January 25 2007 06:56:56) that has been pre-processed with default settings by the PrepServer
Image:CloudySSW.XRT.Figure3.png|'''Figure 9.''' This figure shows PLOTMAN displaying an XRT image (January 25 2007 06:56:56) that has been pre-processed with default settings by the PrepServer
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Image:CloudySSW.TRACE.Figure5.png|'''Figure 10.''' This figure shows PLOTMAN displaying a TRACE image (171 A, January 25 2007, 06:15:09) that has been pre-processed with default settings by the PrepServer. If multiple images were selected in the selection window (see Figure 8), they can be accessed by clicking on "Window_Control" in PLOTMAN's menu panel at the top.
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Image:CloudySSW.TRACE.Figure5.png|'''Figure 10.''' This figure shows PLOTMAN displaying a TRACE image (171 A, January 25 2007, 06:15:09) that has been pre-processed with default settings by the PrepServer.
Image:CloudySSW.RHESSI.EIT.Overlay.Figure.6.png|'''Figure 11.''' This figure shows PLOTMAN displaying a contour overlay of a reconstructed RHESSI clean 6-12keV image on an EIT image (171 A, January 25 2007, 07:00:13). The reconstruction of the RHESSI image as well as the pre-processing of the EIT images was done with the PrepServer.
Image:CloudySSW.RHESSI.EIT.Overlay.Figure.6.png|'''Figure 11.''' This figure shows PLOTMAN displaying a contour overlay of a reconstructed RHESSI clean 6-12keV image on an EIT image (171 A, January 25 2007, 07:00:13). The reconstruction of the RHESSI image as well as the pre-processing of the EIT images was done with the PrepServer.
</gallery>
</gallery>
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==== Example 3 ====
==== Example 3 ====
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<source lang="ittvis_idl">
 
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; Step 1: Search the VSO and return a URL to the TRACE data file closest to January 25 2007 07:00
 
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; Step 2: The TRACE data file contains multiple images. Pre-process images one to 5 and create TRACE objects for them (trace_obj).
 
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;        Not specifying an index would result in VSO_PREP opening the selection widget as shown in Figure 8.
 
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; Step 3: Display all TRACE images in PLOTMAN using standard coloring '''(see Figure XXX)'''
 
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trace_file = [f]vso_files[/f]('25-Jan-2007 07:00', instr='trace')
 
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[p]vso_prep[/p], trace_file, image_no=[1,2,3,4,5], oprep=trace_obj
 
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trace_obj->[p]plotman[/p], /colors
 
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</source>
 
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==== Example 4 ====
 
<source lang="ittvis_idl">
<source lang="ittvis_idl">
; Step 1: Not required
; Step 1: Not required
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[p]vso_prep[/p], instrument='rhessi', im_time_interval=['25-Jan-2007 06:53:44', '25-Jan-2007 06:57:40'], image_alg='clean', im_energy_binning=[6,12], oprep=rhessi_obj
[p]vso_prep[/p], instrument='rhessi', im_time_interval=['25-Jan-2007 06:53:44', '25-Jan-2007 06:57:40'], image_alg='clean', im_energy_binning=[6,12], oprep=rhessi_obj
rhessi_obj->[p]plotman[/p], /colors
rhessi_obj->[p]plotman[/p], /colors
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</source >
 
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==== Example 5 ====
 
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<source lang="ittvis_idl">
 
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; Step 1: Search the VSO and return a URL to the EUVI data file closest to January 25 2007 06:57
 
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; Step 2: The EUVI image is pre-processed (incl. rolling) and an EUVI object is created (euvi_obj)
 
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; Step 3: Display the EUVI image in PLOTMAN using standard coloring '''(see Figure XXX)'''
 
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euvi_file = [f]vso_files[/f]('25-Jan-2007 06:57', instr='euvi')
 
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[p]vso_prep[/p], euvi_file, /roll, oprep=euvi_obj
 
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euvi_obj->[p]plotman[/p], /colors
 
</source>
</source>

Revision as of 21:14, 29 June 2010


Nugget
Number: XXXwarning.png"XXX" is not a number.
1st Author: Laszlo I. Etesi
2nd Author: Brian R. Dennis
Published: 2010 July 5
Next Nugget: TBD
Previous Nugget: TBD
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Contents

NOTE

This nugget is unfinished and still undergoing changes.

Introduction

In our project "Extending the Virtual Solar Observatory (VSO)," we have combined features available in Solar Software (SSW) to produce an environment that supports not only the VSO ability to locate specific data on the Internet but also allows for the retrieval, preparation, display, and analysis of the selected data. Our goal is an integrated analysis experience in IDL that is both easy-to-use for the casual observer but also of value for detailed scientific analysis by more knowledgeable users.

To that end, we have made the transition from a locally oriented setting, where all the analysis is done on the user’s computer, to an extended analysis environment, where IDL has access to services available on other computers through the Internet. We have implemented a form of Cloud Computing that uses the VSO to locate data files of interest through our IDL procedure, SHOW_SYNOP. The data files can be downloaded either directly to the user's computer or through a pre-processing server (PrepServer) that provides remote execution of instrument-specific data preparation procedures. The raw and/or pre-processed data can then be displayed with our GUI plotting suite, PLOTMAN, which can handle different data types (light curves, images, and spectra), and perform basic data analysis. The workflow within this overall integrated environment is shown in Figures 1, 2, and 3, where the numbers correspond to steps 1-2-3 explained below in the text. Note that all of the operations can be controlled using either graphical user interfaces (GUIs) or through the IDL command line, or, and this is often the most efficient approach, through a combination of the two.

Our environment supports data from a growing number of solar instruments that currently includes RHESSI, SOHO/EIT, TRACE, SECCHI/EUVI, HINODE/XRT, and HINODE/EIS.

Minimum Requirements

SHOW_SYNOP IDL Widget

Step 1: Finding the Data

SHOW_SYNOP shown in Figure 4 is an IDL graphical user interface (GUI) to search for and retrieve instrument data within a specified time interval using the VSO or other data finding facilities.

Search results can be directly downloaded into the active SSW IDL environment or first pre-processed through our prep-server. To start searching with SHOW_SYNOP, first open the GUI by typing SHOW_SYNOP in your SSW IDL environment command-line. The red box highlights the VSO search form with "Start Time" and "End Time" specifying the search interval and "remote sites ->" defining the instrument (TRACE in this example). Click on the "Search" button to query the VSO for data files that will be displayed in the list below the search form shown in the green box in Figure 5. All of this capability can also be obtained by executing IDL scripts from the command-line.

SHOW_SYNOP can search data for the following instruments:

Step 2: Pre-processing

Typically, instrument data found with the VSO are unprocessed level-0 data. The PrepServer offers remote pre-processing of those data from within SHOW_SYNOP or from the IDL command-line before or after downloading to the user's computer. The big advantage is that the user does not have to maintain instrument-specific data analysis procedures or calibration files on his computer. Once the files containing the data of interest has been retrieved and prepped if necessary, the file names are displayed in the SHOW_SYNOP window (green box in Figure 5). For more details on the prep-server including accessing it from the IDL command-line, please click here

Step 3: Visualizing

The data are visualized with PLOTMAN, which handles different data types such as light curves, images, spectra, and spectrograms. It provides basic display operations such as zooming, image overlays, solar rotation, etc. To display data with PLOTMAN from within SHOW_SYNOP, simply select a data file (Figure 6, blue box) and click on "Display". If the data file has already been pre-processed, it will be displayed immediately in a PLOTMAN window. Otherwise, it is first sent to the PrepServer for processing. If multiple files have been selected, all are displayed in the same PLOTMAN window (see Figures 9, 10, and 11).

Like all other GUIs discussed in this nugget, PLOTMAN can also be called from the command-line. Examples can be found here.

IDL Command-Line Tools

Step 1: Finding the Data

The VSO search can be initiated directly from the IDL command-line using the procedure VSO_FILES. Two different search strategies are supported:

Data for the following instruments can be searched:

VSO_FILES does not download any data files. Instead, SOCK_COPY or VSO_PREP (see next section) are used.

Step 2: Pre-processing

VSO_PREP allows for data pre-processing from an IDL command-line without the requirement of a local installation of instrument software or calibration data. VSO_PREP takes as a minimum a local file or a URL to a remote file for a parameter. If a URL is provided then the PrepServer will download the data and send them back pre-processed; otherwise they are uploaded to the PrepServer, pre-processed, and downloaded.

The following instrument data can be pre-processed:

Step 3: Visualizing

PLOTMAN displays level-0 and pre-processed data. It is integrated with VSO_PREP and allows visualizing data returned by VSO_PREP with one command.

Examples

Example 1

; Step 1: Search the VSO and return a URL to the Hinode/XRT image closest to January 25 2007 06:57 UT.
; Step 2: Pre-process that data file and create an XRT object (xrt_obj)
; Step 3: Display the data file with PLOTMAN using a standard color table (see Figure 9).
 
xrt_file = vso_files('25-Jan-2007 06:57', instr='xrt')
vso_prep, xrt_file, oprep=xrt_obj
xrt_obj->plotman, /colors

Example 2

; Step 1: Search the VSO and return URLs to EIT images that have been observed between January 25 2007 06:45 and January 25 20007 07:15
; Step 2: Pre-process one EIT image at the time and...
; Step 3: ...display it with PLOTMAN using standard coloring. All images are displayed in the same PLOTMAN window.
 
eit_files = vso_files('25-Jan-2007 06:45', '25-Jan-2007 07:15', instr='eit')
FOR i=0, N_ELEMENTS(eit_files)-1 DO BEGIN $
 vso_prep, eit_files[i], oprep=eit_obj & $
 eit_obj->plotman, /colors, plotman=p & $
ENDFOR

Example 3

; Step 1: Not required
; Step 2: Use VSO_PREP to reconstruct a RHESSI clean 6-12keV image on the PrepServer
; Step 3: Display RHESSI image with PLOTMAN using standard coloring '''(see Figure XXX)'''
 
vso_prep, instrument='rhessi', im_time_interval=['25-Jan-2007 06:53:44', '25-Jan-2007 06:57:40'], image_alg='clean', im_energy_binning=[6,12], oprep=rhessi_obj
rhessi_obj->plotman, /colors

Conclusion

Documentation

Contacts

Facts about Cloudy SolarSoftwareRDF feed
RHESSI Nugget Date5 July 2010  +
RHESSI Nugget First AuthorLaszlo I. Etesi  +
RHESSI Nugget Indexwarning.png"XXX" is not a number.
RHESSI Nugget Second AuthorBrian R. Dennis  +
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